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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924319.1_cds_XP_016472697.1_64901
CDS Infomation

[gene=LOC107794693] [db_xref=GeneID:107794693] [protein=long chain acyl-CoA synthetase 4-like] [protein_id=XP_016472697.1] [location=join(73607..73625,74838..74979,75905..75968,76070..76159,76285..76341,76915..76963,77181..77257,77663..77702,77790..77884,78031..78198,78309..78419,78490..78577,78851..78917,79491..79566,79666..79783,80551..80796,80892..81031,81533..81715,82011..82130,83018..83053)] [gbkey=CDS]
Sequence

ATGTCATCAGTAGTTTGCTCTATATATATATATANGGTTGAACCGGCTAAGCCAGCTAAA
GACGGAAAACCGTCAGTTGGACCGGTTTATCGGAGTTTATTCGCTAAGGGCGGGTTTCCA
CCTCCGATTGAAGGCTTAGATAGCTGTTGGGATATTTTCCGTATGTCAGTGGAGAAATAT
CCCAACAACCGAATGCTTGGCCGCCGTAAGATTGTGGATGGAAAGCCCGGAAAGTATGTG
TGGACGACTTACAAAGAAATATATGACATTGTCATAAAAGTAGGAAATGCCATCCAGAAC
TGTGGTGTAGAACAAGGAGGAAAATGTGGTATTTATGGTGCCAACTGCCCTGAGTGGATT
ATAAGCATGGAGGCATGCAATGCTCATGGACTCTACTGTGTCCCTCTGTACGACACTTTA
GGTGCTGGTGCAGTGGAATTTATCATTTCCCATGCTGAGGTTTCAATTGCTTTTGTTGAG
GAGAAAAAGGTTCCCGAGCTTTTGAAAACATTTCCAAATGCAGCGAAGTACTTGAAGACG
GTTGTGAGTTTTGGGCATGTTACTCCTCAACAAAAGGAAGAGGTTGAAAAGTTTGGAGCG
GCTCTCTTTTCCTGGGATGAGTTTCTACAACTAGGAAGCAAAAATCAGTATGACCTTCCA
GTGAAAAAGAAGACTGATATTTGCACAATAATGTATACTAGTGGAACGACTGGAGAACCC
AAGGGTGTGATGATTTCGAATAATAGCATTGTTACTCTTATAGCTGGAGTGAAGCGTTTT
CTTGAGAGTGTACATGAGGCGTTGAACGTGAATGATGTATATCTCTCATATCTTCCCTTG
GCGCATATCTTTGATCGGGTGATTGAAGAATGTTTCATTAGTCATGGTGCCTCAATTGGA
TTTTGGCGAGGGGATGTCAAGTTACTAACTGAAGACATTGGAGAGCTGAAACCAACTGTC
TTCTGTGCAGTACCTCGGGTATTAGACAGAATATATTCAGGTTTGCAACAGAAAATTTCT
TCAGGGGGTCGGCTAAGGAGCACCCTGTTCAATATTGCATATGCTCGCAAACTTCAATAT
TTGAAGAGTGGGTGTAAATATCACAAAGCATCTCCAATTTCCGACAAAGTTGTTTTCAGT
AAGGTAAAAGATGGGCTAGGAGGCAAAGTGCGCCTTATATTATCTGGAGCAGCACCTCTC
TCATCTCATGTAGAAGCTTTTCTGCGAGTTGTTGCATGTGCTCATGTTCTTCAAGGATAT
GGTCTGACTGAAACATGCGCTGGTACATTTGTATCATTACCCAACCAATTTGATATGCTT
GGTACGGTTGGTCCTCCTGTGCCCAATGTGGACGTGTGTTTGGAGTCCGTTCCTGAAATG
GAATATGACGCTCTTTCAAGCACACCACGTGGAGAAATATGCGTGAGGGGAGACACTGTG
TTTTCTGGTTATTACAAGCGTGAGGACCTTACGAAAGAAGTCATGATTGATGGGTGGTTC
CACACAGGGGATATTGGTGAGTGGCAACCAAATGGTAGCTTGAAGATAATTGATCGCAAG
AAGAATATTTTCAAGCTATCACAAGGTGAATATGTTGCAGTCGAAAATTTGGAGAATATA
TATGGCAATAATCCTGTTATTGACTCAATATGGATATATGGAAGCAGCTTTGAGTCTTTC
CTTGTTGCTGTAGTTAACCCAAACAAACAAGAGGTTGAAAAATGGGCTAAACAGAATGGT
GTCTCTGGAGATTTTAATTCCTTATGTGAAAATTCAAAGGTGAAAGAGCACATACTAGGG
GAACTCACAAAAGCTGCAAAAGAAAAGAAGCTGAAGGGCTTTGAGTTCATAAAAGCTCTA
CACCTTGATCCGGTGCCATTTGACATGGAACGCGACCTTCTGACTCCAACATTTAAGAAG
AAAAGACCACAGTTGCTCAAATACTACAAGGACGTGATTGACACCATGTACAAGGATGCT
AAATGA

Peptide Sequence

PEP ID

XP_016472697.1
PEP Infomation

PREDICTED: long chain acyl-CoA synthetase 4-like [Nicotiana tabacum]
Sequence

MSSVVCSIYIYXVEPAKPAKDGKPSVGPVYRSLFAKGGFPPPIEGLDSCWDIFRMSVEKY
PNNRMLGRRKIVDGKPGKYVWTTYKEIYDIVIKVGNAIQNCGVEQGGKCGIYGANCPEWI
ISMEACNAHGLYCVPLYDTLGAGAVEFIISHAEVSIAFVEEKKVPELLKTFPNAAKYLKT
VVSFGHVTPQQKEEVEKFGAALFSWDEFLQLGSKNQYDLPVKKKTDICTIMYTSGTTGEP
KGVMISNNSIVTLIAGVKRFLESVHEALNVNDVYLSYLPLAHIFDRVIEECFISHGASIG
FWRGDVKLLTEDIGELKPTVFCAVPRVLDRIYSGLQQKISSGGRLRSTLFNIAYARKLQY
LKSGCKYHKASPISDKVVFSKVKDGLGGKVRLILSGAAPLSSHVEAFLRVVACAHVLQGY
GLTETCAGTFVSLPNQFDMLGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEICVRGDTV
FSGYYKREDLTKEVMIDGWFHTGDIGEWQPNGSLKIIDRKKNIFKLSQGEYVAVENLENI
YGNNPVIDSIWIYGSSFESFLVAVVNPNKQEVEKWAKQNGVSGDFNSLCENSKVKEHILG
ELTKAAKEKKLKGFEFIKALHLDPVPFDMERDLLTPTFKKKRPQLLKYYKDVIDTMYKDA
K

Transcript Sequence

Gene sequence data has not been registered.